Publications

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CRISPR delivery with extracellular vesicles: Promises and challenges

Berggreen AH, J Extracell Biol – 2023

Berggreen AH, Petersen JL, Lin L, Benabdellah K, Luo Y.

he CRISPR gene editing tool holds great potential for curing genetic disorders. However, the safe, efficient, and specific delivery of the CRISPR/Cas9 components into cells and tissues remains a challenge. While many currently available delivery methods achieve high levels of gene editing effects in vivo, they often result in genotoxicity and immunogenicity. Extracellular vesicles (EVs), which are cell-derived lipid nanoparticles, are capable of transferring protein and nucleic acid cargoes between cells, making them a promising endogenous alternative to synthetic delivery methods. This review provides a comprehensive analysis of the currently available strategies for EV-mediated delivery of CRISPR/Cas9. These strategies include cell-based, passive loading obtained by overexpression of CRISPR/Cas9, active loading involving protein or RNA dimerization, and loading into already purified EVs. All these approaches suggest that EV-based CRISPR/Cas9 delivery is useful for achieving both in vitro and in vivo gene editing. Despite that, substantial variations in cellular uptake and gene editing efficiencies indicate that further improvement and standardization are required for the therapeutic use of EVs as a CRISPR/Cas9 delivery vehicle. These improvements include, but is not limited to, the high-yield purification of EVs, increased loading and release efficiencies, as well as improved tissue- or cell-specific targeting specificities.

J Extracell Biol. 2023 Sep 21;2(9):e111. doi: https://doi.org/10.1002/jex2.111. eCollection 2023 Sep.
PMID: 38938376 | Doi: https://doi.org/10.1002/jex2.111

Context base editing for splice correction of IVSI-110 β- thalassemia

Naiisseh B, Mol Ther Nucleic Acids – 2024

Naiisseh B, Papasavva PL, Papaioannou NY, Tomazou M, Koniali L, Felekis X, Constantinou CG, Sitarou M, Christou S, Kleanthous M, Lederer CW, Patsali P.

β-Thalassemia is brought about by defective β-globin (HBB [hemoglobin subunit β]) formation and, in severe cases, requires regular blood transfusion and iron chelation for survival. Genome editing of hematopoietic stem cells allows correction of underlying mutations as curative therapy. As potentially safer alternatives to double-strand-break-based editors, base editors (BEs) catalyze base transitions for precision editing of DNA target sites, prompting us to reclone and evaluate two recently published adenine BEs (ABEs; SpRY and SpG) with relaxed protospacer adjacent motif requirements for their ability to correct the common HBB(IVSI-110(G>A)) splice mutation. Nucleofection of ABE components as RNA into patient-derived CD34(+) cells achieved up to 90% editing of upstream sequence elements critical for aberrant splicing, allowing full characterization of the on-target base-editing profile of each ABE and the detection of differences in on-target insertions and deletions. In addition, this study identifies opposing effects on splice correction for two neighboring context bases, establishes the frequency distribution of multiple BE editing events in the editing window, and shows high-efficiency functional correction of HBB(IVSI-110(G>A)) for our ABEs, including at the levels of RNA, protein, and erythroid differentiation.

Mol Ther Nucleic Acids. 2024 Mar 30;35(2):102183. doi: https://doi.org/10.1016/j.omtn.2024.102183. eCollection 2024 Jun 11.
PMID: 38706633 | Doi: https://doi.org/10.1016/j.omtn.2024.102183

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